Hi, my name is

Daniel Crocker.

Biomedical Engineering | University of Minnesota

Building at the intersection of biology and computation.

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01

About Me

Daniel Crocker
Minneapolis, MN

I'm a Biomedical Engineering student in the Honors Program at the University of Minnesota, with an interest in the intersection of computational biology and machine learning. Currently at the Hackel Lab, I'm building StructVar-Bench, a pathogenicity prediction tool examining missense mutations; it combines structural biology, graph neural networks, and large-scale bioinformatics.

Previously, I designed a hybrid brain-computer interface that earned 1st place at the Twin Cities and Minnesota State Regional Science Fair and qualified for ISEF. Outside the lab, I've contributed 300+ volunteer hours, consulted for Thermo Fisher Scientific, and worked as a copy editor sharpening journalistic writing.

I'm passionate about developing innovations where biology and engineering intersect that can make a real difference in people's lives.

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GPA
Top 1%
National Merit Semifinalist
1st
Regional Science Fair & ISEF Qualifier
0+
Volunteer Hours
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Experience

Mar 2026 – Present

Hackel Lab

Student Researcher · University of Minnesota

Building StructVar-Bench: a multi-modal structural dataset and benchmark for missense variant pathogenicity prediction. Integrating ClinVar, UniProt, and AlphaFold data across ~89,000 variants and training graph neural network models with PyTorch Geometric.

Sep 2024 – Jun 2025

Minnetonka Research Program

Student Researcher · Independent Research

Developed a hybrid brain-computer interface combining EEG mental commands with eye-tracking for adaptive assistive robotic control. 1st Place in Biomedical Engineering at the Twin Cities Regional Science Fair; ISEF qualifier.

Jan – Jun 2024

Thermo Fisher Scientific

Student Consultant · VANTAGE Program

Delivered a cybersecurity strategy report for Thermo Fisher's biomedical product line. Conducted primary and secondary research on consumer preferences concerning cybersecurity in biomedical products.

Oct – Dec 2023

Peak Performance Twin Cities

Student Consultant · VANTAGE Program

Provided data-driven hiring recommendations through quantitative and qualitative analysis. Collaborated with team members to present findings and deliver well-rounded strategic solutions.

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Research

0.87 AUC-ROC

StructVar-Bench

Hackel Lab · University of Minnesota

A multi-modal structural dataset and benchmark for missense variant pathogenicity prediction. Built a dataset of ~89,000 missense variants by integrating ClinVar clinical labels, UniProt annotations, and AlphaFold protein structures. Modeled energetic impact of mutations via large-scale FoldX ΔΔG calculations. Engineered graph representations of local protein environments and trained GNN models achieving strong predictive performance.

Python PyTorch Geometric FoldX AlphaFold ClinVar GNN
1st Place · ISEF Qualifier

Hybrid Brain-Computer Interface

Minnetonka Research Program · Independent Research

Hybrid brain-computer interface with continuous learning and eye-tracking for adaptive mental command control. Developed a hybrid model integrating EEG-based mental command training with eye-tracking to improve accuracy and adaptability in assistive robotic control. Competed at Twin Cities and Minnesota State Science & Engineering Fairs.

EEG EMOTIV Eye-Tracking Python Machine Learning
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Skills

Physics
Technical
Languages
Professional
Laboratory
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Get In Touch

I'm always open to discussing research collaborations, new opportunities, or interesting problems at the intersection of biology and technology.